Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RpgrQ9R0X5 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
RpgrQ9R0X5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RpgrQ9R0X5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 AW822252-206ENSMUST00000208904 237 ntBASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RpgrQ9R0X5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Gm5264-201ENSMUST00000190584 848 ntBASIC14.6□□□□□ -0.07
RpgrQ9R0X5 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Gm10154-201ENSMUST00000084445 354 ntBASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RpgrQ9R0X5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RpgrQ9R0X5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms