Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 B9d1os-201ENSMUST00000137010 674 ntBASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm24990-201ENSMUST00000157406 323 ntBASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.06□□□□□ -0.16
Col4a4Q9QZR9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm12403-201ENSMUST00000121384 959 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm25668-201ENSMUST00000157700 129 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm25732-201ENSMUST00000175168 60 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm37489-201ENSMUST00000191883 159 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a4Q9QZR9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm2260-201ENSMUST00000184965 657 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm26315-201ENSMUST00000083890 321 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Gm24447-201ENSMUST00000083977 338 ntBASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Col4a4Q9QZR9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col4a4Q9QZR9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms