Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chaf1aQ9QWF0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm13464-201ENSMUST00000119418 935 ntBASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chaf1aQ9QWF0 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Chaf1aQ9QWF0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chaf1aQ9QWF0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Gm2651-201ENSMUST00000203560 838 ntBASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.07■□□□□ 0.16
Chaf1aQ9QWF0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms