Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sec61a2Q9JLR1 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm16026-204ENSMUST00000162652 683 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm24513-201ENSMUST00000174964 138 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sec61a2Q9JLR1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.96□□□□□ -0.34
Sec61a2Q9JLR1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm27397-201ENSMUST00000184997 107 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm43575-201ENSMUST00000196420 516 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sec61a2Q9JLR1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61a2Q9JLR1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms