Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Upk3aQ9JKX8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Shd-206ENSMUST00000225145 998 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Upk3aQ9JKX8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Gm38294-201ENSMUST00000192831 381 ntBASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Upk3aQ9JKX8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Upk3aQ9JKX8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms