Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.36□□□□□ -0.27
Cdc40Q9DC48 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdc40Q9DC48 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdc40Q9DC48 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdc40Q9DC48 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdc40Q9DC48 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdc40Q9DC48 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm15483-201ENSMUST00000120338 456 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm27321-201ENSMUST00000185021 205 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm38225-201ENSMUST00000194001 393 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.35□□□□□ -0.27
Cdc40Q9DC48 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdc40Q9DC48 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm25287-201ENSMUST00000103846 110 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm22918-201ENSMUST00000103855 110 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm8410-201ENSMUST00000117225 605 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm8749-201ENSMUST00000117737 331 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm18737-201ENSMUST00000173594 937 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Gm27622-201ENSMUST00000183779 60 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Mir7023-201ENSMUST00000185093 64 ntBASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdc40Q9DC48 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cdc40Q9DC48 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Cdc40Q9DC48 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cdc40Q9DC48 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms