Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chmp5Q9D7S9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Chmp5Q9D7S9 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chmp5Q9D7S9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp5Q9D7S9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Chmp5Q9D7S9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Gm16026-204ENSMUST00000162652 683 ntBASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Gm10060-201ENSMUST00000212002 111 ntBASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chmp5Q9D7S9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chmp5Q9D7S9 Gm9103-201ENSMUST00000119371 405 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms