Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag1Q9D3E6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Gm15823-201ENSMUST00000064305 670 ntBASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag1Q9D3E6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Gm37917-201ENSMUST00000194711 392 ntBASIC17.07■□□□□ 0.32
Stag1Q9D3E6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag1Q9D3E6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Stag1Q9D3E6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Gm6912-201ENSMUST00000117218 544 ntBASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Gm12091-201ENSMUST00000146791 830 ntBASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Gm9908-201ENSMUST00000211534 448 ntBASIC17.05■□□□□ 0.32
Stag1Q9D3E6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stag1Q9D3E6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Stag1Q9D3E6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms