Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rnf115Q9D0C1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf115Q9D0C1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf115Q9D0C1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Gm15653-201ENSMUST00000119247 907 ntBASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf115Q9D0C1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Gm45098-201ENSMUST00000207179 657 ntBASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf115Q9D0C1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Gm12859-201ENSMUST00000117834 427 ntBASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Gm13464-201ENSMUST00000119418 935 ntBASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf115Q9D0C1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms