Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpusd4Q9CWX4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpusd4Q9CWX4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Mir3113-201ENSMUST00000175478 76 ntBASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rpusd4Q9CWX4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm13597-201ENSMUST00000121239 375 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm2272-201ENSMUST00000194903 582 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Rpusd4Q9CWX4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpusd4Q9CWX4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms