Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim33Q99PP7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.27□□□□□ -0.13
Trim33Q99PP7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.27□□□□□ -0.13
Trim33Q99PP7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.27□□□□□ -0.13
Trim33Q99PP7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim33Q99PP7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gm18889-201ENSMUST00000174284 929 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Olfr286-202ENSMUST00000205305 969 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.26□□□□□ -0.13
Trim33Q99PP7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim33Q99PP7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gm5479-201ENSMUST00000160578 435 ntBASIC14.25□□□□□ -0.13
Trim33Q99PP7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gm20614-201ENSMUST00000177106 632 ntBASIC14.25□□□□□ -0.13
Trim33Q99PP7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.25□□□□□ -0.13
Trim33Q99PP7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim33Q99PP7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms