Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Gm8227-201ENSMUST00000223306 571 ntBASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh15Q99PJ1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdh15Q99PJ1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Pcdh15Q99PJ1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdh15Q99PJ1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm45186-201ENSMUST00000206874 478 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Gm14381-201ENSMUST00000122105 414 ntBASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdh15Q99PJ1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms