Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm8062-201ENSMUST00000139696 444 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm17420-201ENSMUST00000164753 153 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm42693-201ENSMUST00000196779 631 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm5279-201ENSMUST00000199575 745 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nkx6-1Q99MA9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Gm10478-201ENSMUST00000084451 396 ntBASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Olfr582-201ENSMUST00000098212 960 ntBASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx6-1Q99MA9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Gm13226-201ENSMUST00000117838 404 ntBASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.42□□□□□ -0.26
Nkx6-1Q99MA9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms