Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm4875-201ENSMUST00000118257 786 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm9719-201ENSMUST00000162765 543 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm44719-201ENSMUST00000206404 149 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.6□□□□□ -0.39
Scrt1Q99M85 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scrt1Q99M85 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Gm28631-201ENSMUST00000190740 334 ntBASIC12.59□□□□□ -0.39
Scrt1Q99M85 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.59□□□□□ -0.39
Scrt1Q99M85 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.59□□□□□ -0.39
Scrt1Q99M85 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Scrt1Q99M85 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.58□□□□□ -0.39
Scrt1Q99M85 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scrt1Q99M85 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scrt1Q99M85 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scrt1Q99M85 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scrt1Q99M85 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms