Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cdk5rap3Q99LM2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Gm27301-201ENSMUST00000184012 127 ntBASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Gm2651-201ENSMUST00000203560 838 ntBASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cdk5rap3Q99LM2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdk5rap3Q99LM2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdk5rap3Q99LM2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms