Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cstf3Q99LI7 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Gm5479-201ENSMUST00000160578 435 ntBASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Gm37230-201ENSMUST00000194491 818 ntBASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cstf3Q99LI7 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.88□□□□□ -0.19
Cstf3Q99LI7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cstf3Q99LI7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cstf3Q99LI7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms