Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lims1Q99JW4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lims1Q99JW4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lims1Q99JW4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lims1Q99JW4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lims1Q99JW4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Lims1Q99JW4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Lims1Q99JW4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Lims1Q99JW4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Lims1Q99JW4 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.08□□□□□ -0.31
Lims1Q99JW4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Gm27301-201ENSMUST00000184012 127 ntBASIC13.08□□□□□ -0.32
Lims1Q99JW4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.08□□□□□ -0.32
Lims1Q99JW4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lims1Q99JW4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.07□□□□□ -0.32
Lims1Q99JW4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Gm9385-201ENSMUST00000117563 472 ntBASIC13.07□□□□□ -0.32
Lims1Q99JW4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.07□□□□□ -0.32
Lims1Q99JW4 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.07□□□□□ -0.32
Lims1Q99JW4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lims1Q99JW4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Gm1401-201ENSMUST00000122048 772 ntBASIC13.06□□□□□ -0.32
Lims1Q99JW4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.06□□□□□ -0.32
Lims1Q99JW4 Gm8000-201ENSMUST00000188378 592 ntBASIC13.06□□□□□ -0.32
Lims1Q99JW4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms