Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfc4Q99J62 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.5■□□□□ 0.23
Rfc4Q99J62 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Gm4984-201ENSMUST00000115987 360 ntBASIC16.5■□□□□ 0.23
Rfc4Q99J62 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.5■□□□□ 0.23
Rfc4Q99J62 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.5■□□□□ 0.23
Rfc4Q99J62 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfc4Q99J62 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Gm11425-201ENSMUST00000119608 498 ntBASIC16.49■□□□□ 0.23
Rfc4Q99J62 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 AY702102-202ENSMUST00000194651 1173 ntBASIC16.49■□□□□ 0.23
Rfc4Q99J62 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Gm43630-201ENSMUST00000201550 776 ntBASIC16.49■□□□□ 0.23
Rfc4Q99J62 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.49■□□□□ 0.23
Rfc4Q99J62 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Gm9396-201ENSMUST00000076703 567 ntBASIC16.49■□□□□ 0.23
Rfc4Q99J62 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rfc4Q99J62 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.48■□□□□ 0.23
Rfc4Q99J62 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.48■□□□□ 0.23
Rfc4Q99J62 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rfc4Q99J62 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rfc4Q99J62 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rfc4Q99J62 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.47■□□□□ 0.23
Rfc4Q99J62 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms