Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb1Q91Y08 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb1Q91Y08 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm25287-201ENSMUST00000103846 110 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm22918-201ENSMUST00000103855 110 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm12882-201ENSMUST00000121696 517 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm29310-201ENSMUST00000185468 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21825-201ENSMUST00000185728 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm29109-201ENSMUST00000185895 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21896-201ENSMUST00000186520 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21873-201ENSMUST00000186728 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21794-201ENSMUST00000187056 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21880-201ENSMUST00000187275 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21826-201ENSMUST00000187451 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21198-201ENSMUST00000188393 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21749-201ENSMUST00000189343 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21901-201ENSMUST00000189568 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm29424-201ENSMUST00000189716 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm28599-201ENSMUST00000189838 694 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21867-201ENSMUST00000189917 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm29269-201ENSMUST00000190087 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21722-201ENSMUST00000190153 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm28423-201ENSMUST00000190701 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21899-201ENSMUST00000190745 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21910-201ENSMUST00000191163 696 ntBASIC14.91□□□□□ -0.02
Pcdhb1Q91Y08 Gm21849-201ENSMUST00000191571 696 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms