Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm11780-201ENSMUST00000136880 516 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm27525-201ENSMUST00000184465 107 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm6089-201ENSMUST00000197666 938 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhb3Q91XZ7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhb3Q91XZ7 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.4□□□□□ -0.11
Pcdhb3Q91XZ7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.39□□□□□ -0.11
Pcdhb3Q91XZ7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms