Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm11779-201ENSMUST00000118541 368 ntBASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm17271-201ENSMUST00000165535 355 ntBASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm44492-201ENSMUST00000197012 141 ntBASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 AW822252-206ENSMUST00000208904 237 ntBASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga3Q91XY5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga3Q91XY5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm8749-201ENSMUST00000117737 331 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm13464-201ENSMUST00000119418 935 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm23547-201ENSMUST00000158210 271 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pcdhga3Q91XY5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms