Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Gm9396-201ENSMUST00000076703 567 ntBASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc44a4Q91VA1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Slc44a4Q91VA1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Slc44a4Q91VA1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Gm27892-201ENSMUST00000185017 106 ntBASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Gm18027-201ENSMUST00000218947 619 ntBASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Slc44a4Q91VA1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms