Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.26■□□□□ 0.03
TraipQ8VIG6 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.26■□□□□ 0.03
TraipQ8VIG6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Gm38273-201ENSMUST00000194987 2382 ntBASIC15.26■□□□□ 0.03
TraipQ8VIG6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TraipQ8VIG6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm37057-201ENSMUST00000192624 1916 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm5745-201ENSMUST00000183748 313 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm28760-201ENSMUST00000185995 736 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Gm45668-201ENSMUST00000211271 493 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.25■□□□□ 0.03
TraipQ8VIG6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
TraipQ8VIG6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.24■□□□□ 0.03
TraipQ8VIG6 Gm19220-201ENSMUST00000222682 803 ntBASIC15.24■□□□□ 0.03
TraipQ8VIG6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.24■□□□□ 0.03
TraipQ8VIG6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TraipQ8VIG6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms