Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rpap2Q8VC34 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Gm5566-201ENSMUST00000116118 459 ntBASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpap2Q8VC34 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rpap2Q8VC34 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Gm6222-201ENSMUST00000120787 396 ntBASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpap2Q8VC34 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Gm15693-201ENSMUST00000120470 637 ntBASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Gm7774-201ENSMUST00000200064 533 ntBASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Gm5779-201ENSMUST00000218467 910 ntBASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpap2Q8VC34 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms