Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps39Q8R5L3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps39Q8R5L3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Mir8117-201ENSMUST00000184773 107 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm17968-201ENSMUST00000194902 784 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Gm5364-201ENSMUST00000216789 889 ntBASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Vps39Q8R5L3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps39Q8R5L3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms