Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Slf1Q8R3P9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Birc2-201ENSMUST00000054878 378 ntBASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Slf1Q8R3P9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Gm10819-201ENSMUST00000099988 561 ntBASIC14.53□□□□□ -0.08
Slf1Q8R3P9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Slf1Q8R3P9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Slf1Q8R3P9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44357-201ENSMUST00000195897 142 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm19658-201ENSMUST00000196231 138 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44367-201ENSMUST00000196836 138 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44350-201ENSMUST00000197197 138 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44390-201ENSMUST00000197533 144 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44313-201ENSMUST00000198018 138 ntBASIC14.52□□□□□ -0.09
Slf1Q8R3P9 Gm44486-201ENSMUST00000198508 138 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms