Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm8749-201ENSMUST00000117737 331 ntBASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ebf4Q8K4J2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm8584-201ENSMUST00000171982 758 ntBASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf4Q8K4J2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ebf4Q8K4J2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Olfr129-201ENSMUST00000122318 993 ntBASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gm27646-201ENSMUST00000183989 110 ntBASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gm17808-201ENSMUST00000200859 894 ntBASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf4Q8K4J2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms