Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip3Q8CHD8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Gm28760-201ENSMUST00000185995 736 ntBASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip3Q8CHD8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Gm5186-201ENSMUST00000218781 920 ntBASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Carlr-201ENSMUST00000181515 2574 ntBASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip3Q8CHD8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rab11fip3Q8CHD8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Ldb3-207ENSMUST00000227819 1499 ntBASIC18.52■□□□□ 0.55
Rab11fip3Q8CHD8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Gm5745-201ENSMUST00000183748 313 ntBASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rab11fip3Q8CHD8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms