Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm18057-201ENSMUST00000208220 503 ntBASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm45612-201ENSMUST00000211320 160 ntBASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.55□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Hist1h2aaQ8CGP4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm14042-201ENSMUST00000120139 833 ntBASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Hist1h2aaQ8CGP4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms