Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup88Q8CEC0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Mir7023-201ENSMUST00000185093 64 ntBASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup88Q8CEC0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Nup88Q8CEC0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nup88Q8CEC0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
Nup88Q8CEC0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nup88Q8CEC0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.95■□□□□ 0.3
Nup88Q8CEC0 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nup88Q8CEC0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Nup88Q8CEC0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms