Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.55□□□□□ -0.08
Sh3rf2Q8BZT2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Carlr-201ENSMUST00000181515 2574 ntBASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm12882-201ENSMUST00000121696 517 ntBASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sh3rf2Q8BZT2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Gm15393-201ENSMUST00000120499 219 ntBASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sh3rf2Q8BZT2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sh3rf2Q8BZT2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Gm12585-201ENSMUST00000117307 290 ntBASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Sh3rf2Q8BZT2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms