Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Usp47Q8BY87 Ldb3-207ENSMUST00000227819 1499 ntBASIC20.17■□□□□ 0.82
Usp47Q8BY87 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.17■□□□□ 0.82
Usp47Q8BY87 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Gtpbp10-211ENSMUST00000198799 648 ntBASIC20.17■□□□□ 0.82
Usp47Q8BY87 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp47Q8BY87 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 H2-Pa-201ENSMUST00000182803 626 ntBASIC20.16■□□□□ 0.82
Usp47Q8BY87 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm9797-201ENSMUST00000052902 613 ntBASIC20.16■□□□□ 0.82
Usp47Q8BY87 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Usp47Q8BY87 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Gm6283-201ENSMUST00000182369 1000 ntBASIC20.15■□□□□ 0.82
Usp47Q8BY87 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC20.15■□□□□ 0.82
Usp47Q8BY87 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp47Q8BY87 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC20.14■□□□□ 0.81
Usp47Q8BY87 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Usp47Q8BY87 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms