Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col16a1Q8BLX7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.52■□□□□ 0.55
Col16a1Q8BLX7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm6152-201ENSMUST00000151704 340 ntBASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm27682-201ENSMUST00000183930 110 ntBASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col16a1Q8BLX7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm8213-201ENSMUST00000118191 441 ntBASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm13350-201ENSMUST00000120519 479 ntBASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm29705-201ENSMUST00000212598 474 ntBASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col16a1Q8BLX7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm29608-201ENSMUST00000190444 463 ntBASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm24526-201ENSMUST00000082921 158 ntBASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Col16a1Q8BLX7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Col16a1Q8BLX7 Gm5069-202ENSMUST00000192714 1011 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms