Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm27682-201ENSMUST00000183930 110 ntBASIC20.08■□□□□ 0.8
Usp54Q8BL06 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.08■□□□□ 0.8
Usp54Q8BL06 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp54Q8BL06 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Gm38002-201ENSMUST00000193255 180 ntBASIC20.07■□□□□ 0.8
Usp54Q8BL06 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Gm5161-201ENSMUST00000075243 853 ntBASIC20.07■□□□□ 0.8
Usp54Q8BL06 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp54Q8BL06 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Gm13730-201ENSMUST00000121036 1462 ntBASIC20.06■□□□□ 0.8
Usp54Q8BL06 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp54Q8BL06 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.05■□□□□ 0.8
Usp54Q8BL06 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Gm17870-201ENSMUST00000219489 1174 ntBASIC20.05■□□□□ 0.8
Usp54Q8BL06 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp54Q8BL06 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.04■□□□□ 0.8
Usp54Q8BL06 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC20.04■□□□□ 0.8
Usp54Q8BL06 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC20.04■□□□□ 0.8
Usp54Q8BL06 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp54Q8BL06 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp54Q8BL06 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms