Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm7230-201ENSMUST00000173026 815 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gm45167-201ENSMUST00000208007 322 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gm6376-201ENSMUST00000209407 580 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Acot6-202ENSMUST00000222921 3622 ntBASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim6Q8BGE7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Gm6550-201ENSMUST00000187574 993 ntBASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Birc2-201ENSMUST00000054878 378 ntBASIC15.27■□□□□ 0.04
Trim6Q8BGE7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim6Q8BGE7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gm9726-201ENSMUST00000180321 678 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gm27459-201ENSMUST00000184860 107 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Rps4l-201ENSMUST00000071745 943 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim6Q8BGE7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim6Q8BGE7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms