Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Gm8097-201ENSMUST00000117903 829 ntBASIC14.98□□□□□ -0.01
Prdm4Q80V63 Gm11452-201ENSMUST00000122376 690 ntBASIC14.98□□□□□ -0.01
Prdm4Q80V63 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Gm4535-201ENSMUST00000182274 558 ntBASIC14.98□□□□□ -0.01
Prdm4Q80V63 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.98□□□□□ -0.01
Prdm4Q80V63 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Gm10355-201ENSMUST00000097146 517 ntBASIC14.98□□□□□ -0.01
Prdm4Q80V63 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prdm4Q80V63 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 AW822252-206ENSMUST00000208904 237 ntBASIC14.97□□□□□ -0.01
Prdm4Q80V63 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.97□□□□□ -0.01
Prdm4Q80V63 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.97□□□□□ -0.01
Prdm4Q80V63 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Prdm4Q80V63 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prdm4Q80V63 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.96□□□□□ -0.01
Prdm4Q80V63 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Rps4l-201ENSMUST00000071745 943 ntBASIC14.96□□□□□ -0.01
Prdm4Q80V63 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prdm4Q80V63 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prdm4Q80V63 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Prdm4Q80V63 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Prdm4Q80V63 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms