Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vma21Q78T54 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vma21Q78T54 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.71□□□□□ -0.53
Vma21Q78T54 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Vma21Q78T54 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Gm28659-201ENSMUST00000188013 759 ntBASIC11.71□□□□□ -0.53
Vma21Q78T54 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Gm2272-201ENSMUST00000194903 582 ntBASIC11.71□□□□□ -0.53
Vma21Q78T54 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.71□□□□□ -0.53
Vma21Q78T54 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.71□□□□□ -0.53
Vma21Q78T54 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Vma21Q78T54 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vma21Q78T54 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vma21Q78T54 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Vma21Q78T54 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vma21Q78T54 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vma21Q78T54 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Vma21Q78T54 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.7□□□□□ -0.54
Vma21Q78T54 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.7□□□□□ -0.54
Vma21Q78T54 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Vma21Q78T54 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.7□□□□□ -0.54
Vma21Q78T54 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Vma21Q78T54 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Vma21Q78T54 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.69□□□□□ -0.54
Vma21Q78T54 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.69□□□□□ -0.54
Vma21Q78T54 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Vma21Q78T54 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Vma21Q78T54 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.69□□□□□ -0.54
Vma21Q78T54 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms