Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm11439-201ENSMUST00000118598 409 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm13612-201ENSMUST00000119276 390 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm24255-201ENSMUST00000104481 128 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm20426-201ENSMUST00000173657 440 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 Gm29396-201ENSMUST00000185659 716 ntBASIC12.08□□□□□ -0.48
Rif1Q6PR54 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Rif1Q6PR54 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Olfr284-202ENSMUST00000206647 966 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Gm45118-201ENSMUST00000208928 825 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Gm8227-201ENSMUST00000223306 571 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Gm2260-201ENSMUST00000184965 657 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.07□□□□□ -0.48
Rif1Q6PR54 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rif1Q6PR54 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rif1Q6PR54 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm29705-201ENSMUST00000212598 474 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Gm6983-201ENSMUST00000214912 628 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rif1Q6PR54 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.06□□□□□ -0.48
Rif1Q6PR54 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms