Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rad54bQ6PFE3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rad54bQ6PFE3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.46□□□□□ -0.1
Rad54bQ6PFE3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rad54bQ6PFE3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rad54bQ6PFE3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Gm27920-201ENSMUST00000183953 96 ntBASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rad54bQ6PFE3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rad54bQ6PFE3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms