Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.65□□□□□ -0.22
Rnf220Q6PDX6 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Rnf220Q6PDX6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gm19164-201ENSMUST00000210667 640 ntBASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Pck2-205ENSMUST00000226352 2784 ntBASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rnf220Q6PDX6 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Gm12497-201ENSMUST00000138778 237 ntBASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Mir7071-201ENSMUST00000184847 69 ntBASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.63□□□□□ -0.23
Rnf220Q6PDX6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Gm8344-201ENSMUST00000119813 856 ntBASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rnf220Q6PDX6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms