Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm14701-201ENSMUST00000117156 348 ntBASIC14.03□□□□□ -0.16
Vsx2Q61412 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm11543-201ENSMUST00000120758 370 ntBASIC14.03□□□□□ -0.16
Vsx2Q61412 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.03□□□□□ -0.16
Vsx2Q61412 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Mir6990-201ENSMUST00000183724 91 ntBASIC14.03□□□□□ -0.16
Vsx2Q61412 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vsx2Q61412 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vsx2Q61412 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vsx2Q61412 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.02□□□□□ -0.16
Vsx2Q61412 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.02□□□□□ -0.16
Vsx2Q61412 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vsx2Q61412 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.02□□□□□ -0.16
Vsx2Q61412 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.02□□□□□ -0.17
Vsx2Q61412 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vsx2Q61412 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.02□□□□□ -0.17
Vsx2Q61412 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Vsx2Q61412 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vsx2Q61412 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vsx2Q61412 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm43125-201ENSMUST00000201724 730 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Vsx2Q61412 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vsx2Q61412 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vsx2Q61412 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.01□□□□□ -0.17
Vsx2Q61412 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.01□□□□□ -0.17
Vsx2Q61412 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms