Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Gm6550-201ENSMUST00000187574 993 ntBASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pfdn4Q3UWL8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gm14042-201ENSMUST00000120139 833 ntBASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pfdn4Q3UWL8 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn4Q3UWL8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Pfdn4Q3UWL8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn4Q3UWL8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pfdn4Q3UWL8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Gm13464-201ENSMUST00000119418 935 ntBASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Gm45167-201ENSMUST00000208007 322 ntBASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn4Q3UWL8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn4Q3UWL8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn4Q3UWL8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn4Q3UWL8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn4Q3UWL8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pfdn4Q3UWL8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms