Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Gm18062-201ENSMUST00000208020 547 ntBASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Gm18055-201ENSMUST00000208254 547 ntBASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Puf60Q3UEB3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Sybu-209ENSMUST00000228639 4113 ntBASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Puf60Q3UEB3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Puf60Q3UEB3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Gm43094-201ENSMUST00000196549 921 ntBASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Puf60Q3UEB3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm15824-201ENSMUST00000119516 955 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm13385-201ENSMUST00000121089 220 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm2495-201ENSMUST00000191160 466 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm19078-201ENSMUST00000206311 727 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Gm45630-201ENSMUST00000210243 1911 ntBASIC19.57■□□□□ 0.72
Puf60Q3UEB3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Puf60Q3UEB3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Puf60Q3UEB3 Gm42471-201ENSMUST00000201457 1865 ntBASIC19.56■□□□□ 0.72
Puf60Q3UEB3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Puf60Q3UEB3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms