Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 BC001981-202ENSMUST00000191393 1545 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Gm15653-201ENSMUST00000119247 907 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Mir125a-201ENSMUST00000083545 68 ntBASIC13.51□□□□□ -0.25
Mmp25Q3U435 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Mmp25Q3U435 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Mmp25Q3U435 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm13453-201ENSMUST00000118708 357 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm14767-201ENSMUST00000121559 586 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm17837-201ENSMUST00000186435 985 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm6888-201ENSMUST00000221983 706 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.5□□□□□ -0.25
Mmp25Q3U435 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp25Q3U435 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.49□□□□□ -0.25
Mmp25Q3U435 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.49□□□□□ -0.25
Mmp25Q3U435 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp25Q3U435 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms