Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Fndc4Q3TR08 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gm45167-201ENSMUST00000208007 322 ntBASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Fndc4Q3TR08 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gm43767-201ENSMUST00000198933 381 ntBASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fndc4Q3TR08 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fndc4Q3TR08 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms