Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.84□□□□□ -0.51
Trim63Q38HM4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.84□□□□□ -0.51
Trim63Q38HM4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim63Q38HM4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim63Q38HM4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Trim63Q38HM4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim63Q38HM4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim63Q38HM4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Gm44450-201ENSMUST00000199528 114 ntBASIC11.83□□□□□ -0.52
Trim63Q38HM4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim63Q38HM4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gm7638-201ENSMUST00000121348 967 ntBASIC11.82□□□□□ -0.52
Trim63Q38HM4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Gm10033-202ENSMUST00000211874 928 ntBASIC11.82□□□□□ -0.52
Trim63Q38HM4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim63Q38HM4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.82□□□□□ -0.52
Trim63Q38HM4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim63Q38HM4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms