Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Gm2651-201ENSMUST00000203560 838 ntBASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Mir5126-201ENSMUST00000175513 77 ntBASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptchd3Q0EEE2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Gm27628-201ENSMUST00000184911 107 ntBASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptchd3Q0EEE2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms