Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC21.61■■□□□ 1.05
Col17a1Q07563 Gm13316-201ENSMUST00000140537 691 ntBASIC21.61■■□□□ 1.05
Col17a1Q07563 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Gm9555-201ENSMUST00000200908 583 ntBASIC21.61■■□□□ 1.05
Col17a1Q07563 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC21.61■■□□□ 1.05
Col17a1Q07563 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC21.61■■□□□ 1.05
Col17a1Q07563 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Col17a1Q07563 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
Col17a1Q07563 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Col17a1Q07563 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Col17a1Q07563 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Col17a1Q07563 Gm12795-201ENSMUST00000117594 539 ntBASIC21.6■■□□□ 1.05
Col17a1Q07563 Gm15544-201ENSMUST00000118776 1531 ntBASIC21.6■■□□□ 1.05
Col17a1Q07563 Gm8908-201ENSMUST00000121633 1024 ntBASIC21.6■■□□□ 1.05
Col17a1Q07563 Gm7666-201ENSMUST00000146631 819 ntBASIC21.6■■□□□ 1.05
Col17a1Q07563 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Col17a1Q07563 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col17a1Q07563 AC132901.1-201ENSMUST00000224345 508 ntBASIC21.6■■□□□ 1.05
Col17a1Q07563 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Col17a1Q07563 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col17a1Q07563 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Col17a1Q07563 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC21.59■■□□□ 1.05
Col17a1Q07563 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 Gm38210-201ENSMUST00000191944 809 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 Ighv1-51-201ENSMUST00000192903 354 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 Gm44262-201ENSMUST00000204969 372 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 Spcs1-203ENSMUST00000226374 592 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 AC154276.3-201ENSMUST00000227643 998 ntBASIC21.59■■□□□ 1.05
Col17a1Q07563 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col17a1Q07563 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col17a1Q07563 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col17a1Q07563 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col17a1Q07563 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col17a1Q07563 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col17a1Q07563 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col17a1Q07563 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col17a1Q07563 Gm9252-201ENSMUST00000172364 1602 ntBASIC21.58■■□□□ 1.05
Col17a1Q07563 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Col17a1Q07563 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC21.58■■□□□ 1.04
Col17a1Q07563 Gm44136-201ENSMUST00000203819 1106 ntBASIC21.58■■□□□ 1.04
Col17a1Q07563 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC21.58■■□□□ 1.04
Col17a1Q07563 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.04
Col17a1Q07563 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col17a1Q07563 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
Col17a1Q07563 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Col17a1Q07563 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm16481-201ENSMUST00000119074 1227 ntBASIC21.57■■□□□ 1.04
Col17a1Q07563 Gm25545-201ENSMUST00000122673 323 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms