Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.24□□□□□ -0.29
Cacna1aP97445 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cacna1aP97445 Gm13350-201ENSMUST00000120519 479 ntBASIC13.24□□□□□ -0.29
Cacna1aP97445 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cacna1aP97445 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Mir7654-201ENSMUST00000185082 70 ntBASIC13.23□□□□□ -0.29
Cacna1aP97445 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.23□□□□□ -0.29
Cacna1aP97445 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.23□□□□□ -0.29
Cacna1aP97445 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.23□□□□□ -0.29
Cacna1aP97445 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cacna1aP97445 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.22□□□□□ -0.29
Cacna1aP97445 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Gm14660-201ENSMUST00000119809 575 ntBASIC13.22□□□□□ -0.29
Cacna1aP97445 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cacna1aP97445 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cacna1aP97445 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.21□□□□□ -0.29
Cacna1aP97445 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.21□□□□□ -0.29
Cacna1aP97445 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Cacna1aP97445 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.21□□□□□ -0.29
Cacna1aP97445 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.21□□□□□ -0.29
Cacna1aP97445 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.21□□□□□ -0.29
Cacna1aP97445 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cacna1aP97445 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms