Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.72■□□□□ 0.11
Lig3P97386 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lig3P97386 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Lig3P97386 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lig3P97386 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lig3P97386 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lig3P97386 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.71■□□□□ 0.11
Lig3P97386 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Lig3P97386 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Lig3P97386 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Gm12134-201ENSMUST00000122109 520 ntBASIC15.71■□□□□ 0.11
Lig3P97386 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.71■□□□□ 0.11
Lig3P97386 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.71■□□□□ 0.11
Lig3P97386 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.71■□□□□ 0.11
Lig3P97386 Gm9794-201ENSMUST00000202370 423 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.71■□□□□ 0.11
Lig3P97386 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Gm10154-201ENSMUST00000084445 354 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.71■□□□□ 0.11
Lig3P97386 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Lig3P97386 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lig3P97386 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lig3P97386 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.71■□□□□ 0.1
Lig3P97386 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lig3P97386 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Lig3P97386 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lig3P97386 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lig3P97386 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.7■□□□□ 0.1
Lig3P97386 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.7■□□□□ 0.1
Lig3P97386 Gm6888-201ENSMUST00000221983 706 ntBASIC15.7■□□□□ 0.1
Lig3P97386 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.7■□□□□ 0.1
Lig3P97386 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.7■□□□□ 0.1
Lig3P97386 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Lig3P97386 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lig3P97386 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lig3P97386 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.69■□□□□ 0.1
Lig3P97386 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.69■□□□□ 0.1
Lig3P97386 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.69■□□□□ 0.1
Lig3P97386 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lig3P97386 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.69■□□□□ 0.1
Lig3P97386 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Lig3P97386 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.69■□□□□ 0.1
Lig3P97386 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lig3P97386 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.69■□□□□ 0.1
Lig3P97386 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.69■□□□□ 0.1
Lig3P97386 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
Lig3P97386 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lig3P97386 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.68■□□□□ 0.1
Lig3P97386 Grk6-207ENSMUST00000225925 2769 ntBASIC15.68■□□□□ 0.1
Lig3P97386 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms